desolvate

single-shot desolvation (no inheritance)

Single-valued attributes:

  • psf: name of input PSF file

  • pdb: name of input PDB file (optional)

  • keepatselstr: VMD atomselect string for atoms you want to keep (default: protein or lipid or glycan)

  • idx_outfile: name of output index file for catdcd (default: dry.idx)

  • psf_outfile: name of output PSF file (default: dry.psf)

  • dcd_outfile: name of output DCD file (default: dry.dcd)

  • dcd_infiles: ordered list of names of input DCD files

  • dcd_stride: stride for output DCD file (default: 1)