`source`¶

Specifies the processing and interpretation of the initial source coordinate file

Single-valued attributes:

biological_assembly: integer index of the biological assembly to construct; default is 0, signifying that the asymmetric unit is to be used (default: 0)

transform_reserves: dictionary keyed by chain IDs in the asymmetric unit with values that are lists of chain ID’s for symmetry-related chains in other units of the biological assembly

remap_chainIDs: dictionary mapping of chainIDs in structure input to new chainIDs

reserialize: If true, resets the serial numbers of all atoms based on their order in the input structure file – use with caution!! (default: False)

model: model number to use if there are multiple models in the file

cif_residue_map_file: name of output file to write a mapping of CIF chain-residue number to author chain-residue number-insertion
include: Logical expressions involving atom attributess used in series to specify those atoms to be included

Example:
- chainID == 'A'
- resname == 'GLY'
- chainID in ['A', 'B']
exclude: List of logical expressions involving atom attributes used in parallel to specify those atoms to be excluded

Subattribute:

sequence

source¶

`source`¶